STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dbac_2208Acetyltransferase; KEGG: dvl:Dvul_3057 acetyltransferase. (265 aa)    
Predicted Functional Partners:
Dbac_2207
PFAM: transferase hexapeptide repeat containing protein; KEGG: dvl:Dvul_3056 hexapaptide repeat-containing transferase.
 
     0.905
Dbac_2210
KEGG: dvl:Dvul_3059 glycosyl transferase, group 1.
 
    0.826
Dbac_2209
PFAM: glycosyl transferase group 1; KEGG: dvu:DVUA0051 glycosyl transferase, group 1 family protein.
 
    0.818
Dbac_3285
Acetyltransferase (isoleucine patch superfamily)-like protein; KEGG: rle:RL0815 putative O-acetyl transferase.
  
     0.757
Dbac_2547
KEGG: pph:Ppha_0562 putative acetyltransferase.
  
     0.749
Dbac_2211
PFAM: polysaccharide biosynthesis protein; KEGG: dvu:DVUA0049 polysaccharide biosynthesis family protein.
 
  
 0.737
Dbac_2214
PFAM: glycosyl transferase family 2; KEGG: dvl:Dvul_3063 glycosyl transferase family protein.
 
   
 0.693
Dbac_0821
TIGRFAM: phosphonate metabolim protein, transferase hexapeptide repeat family; KEGG: azc:AZC_0705 putative acetyltransferase.
 
     0.690
Dbac_2212
PFAM: O-antigen polymerase; KEGG: dvu:DVUA0048 exopolysaccharide production protein, putative.
 
    0.686
Dbac_2203
PFAM: glycosyl hydrolase BNR repeat-containing protein; KEGG: dvu:DVUA0058 BNR/Asp-box repeat-containing protein.
 
     0.685
Your Current Organism:
Desulfomicrobium baculatum
NCBI taxonomy Id: 525897
Other names: D. baculatum DSM 4028, Desulfomicrobium baculatum DSM 4028, Desulfomicrobium baculatum str. DSM 4028, Desulfomicrobium baculatum strain DSM 4028
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.