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Sdel_0028 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0028" - Class V aminotransferase in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0028Class V aminotransferase (380 aa)    
Predicted Functional Partners:
Sdel_0026
Hypothetical protein (354 aa)
 
          0.938
Sdel_0027
SirA family protein (70 aa)
 
          0.919
Sdel_0029
Hypothetical protein (72 aa)
              0.902
Sdel_2153
Nitrogen-fixing NifU domain-containing protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (329 aa)
   
 
  0.877
Sdel_0198
UBA/THIF-type NAD/FAD binding protein (214 aa)
     
      0.751
glnD
(protein-PII) uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism (844 aa)
       
      0.614
Sdel_0030
MOSC domain-containing protein (230 aa)
   
        0.609
Sdel_2054
Selenium metabolism protein YedF (196 aa)
 
          0.607
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (343 aa)
 
     
  0.593
Sdel_1435
Hypothetical protein (99 aa)
 
   
  0.566
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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