STRINGSTRING
Sdel_0033 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0033" - Hypothetical protein in Sulfurospirillum deleyianum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0033Hypothetical protein (263 aa)    
Predicted Functional Partners:
Sdel_0034
AMMECR1 domain-containing protein (180 aa)
        0.998
Sdel_0629
Radical SAM protein (343 aa)
          0.954
Sdel_2070
Radical SAM protein (593 aa)
          0.858
Sdel_0032
SMC domain-containing protein (440 aa)
              0.644
Sdel_0031
Hypothetical protein (240 aa)
              0.644
Sdel_1369
Riboflavin biosynthesis protein RibF (293 aa)
     
      0.602
Sdel_0036
Hypothetical protein (298 aa)
   
        0.579
Sdel_0035
Hypothetical protein (132 aa)
              0.570
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (463 aa)
 
        0.531
mqnE
Radical SAM protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1- carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate (354 aa)
     
      0.514
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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