STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0050TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein; KEGG: sun:SUN_0257 hypothetical protein. (231 aa)    
Predicted Functional Partners:
Sdel_0052
TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; KEGG: tdn:Suden_1239 anaerobic ribonucleoside triphosphate reductase.
  
 0.991
Sdel_0051
KEGG: cff:CFF8240_0023 hypothetical protein.
 
  
 0.819
Sdel_0049
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.
     
 0.599
Sdel_0567
PFAM: iron-containing alcohol dehydrogenase; KEGG: gur:Gura_3532 iron-containing alcohol dehydrogenase.
  
  
 0.511
Sdel_1898
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
     
 0.511
Sdel_0047
KEGG: nis:NIS_0045 protein-L-isoaspartate O- methyltransferase; TIGRFAM: protein-L-isoaspartate O- methyltransferase; PFAM: protein-L-isoaspartate(D-aspartate) O- methyltransferase.
       0.508
Sdel_0048
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: abu:Abu_1765 putative nitrilase/cyanide hydratase.
  
    0.501
Sdel_1045
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.412
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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