STRINGSTRING
Sdel_0053 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0053" - Aspartate racemase in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0053Aspartate racemase (233 aa)    
Predicted Functional Partners:
Sdel_2216
Asparagine synthase (596 aa)
       
    0.941
Sdel_2009
Aspartate ammonia-lyase (476 aa)
       
    0.928
Sdel_2008
Aspartate ammonia-lyase (468 aa)
       
    0.928
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP (415 aa)
         
  0.901
Sdel_2006
L-asparaginase, type II (348 aa)
       
    0.900
Sdel_1178
L-asparaginase, type II (347 aa)
       
    0.900
Sdel_0441
Asparaginase/glutaminase (164 aa)
       
    0.900
Sdel_1291
Class I and II aminotransferase (389 aa)
         
    0.900
argG
Argininosuccinate synthase (409 aa)
         
    0.900
Sdel_0593
L-aspartate oxidase; Catalyzes the oxidation of L-aspartate to iminoaspartate (485 aa)
         
    0.900
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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