STRINGSTRING
Sdel_0056 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0056" - Pseudouridine synthase in Sulfurospirillum deleyianum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0056Pseudouridine synthase (302 aa)    
Predicted Functional Partners:
Sdel_0057
Fumarylacetoacetate hydrolase (204 aa)
   
        0.864
Sdel_0055
Adenylosuccinate lyase (442 aa)
   
        0.740
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) (237 aa)
   
        0.704
Sdel_0681
glutaminyl-tRNA synthetase (748 aa)
 
   
  0.689
rplQ
50S ribosomal protein L17 (116 aa)
   
 
  0.687
Sdel_0865
Exoribonuclease II (648 aa)
   
 
  0.667
Sdel_0673
methionyl-tRNA synthetase (642 aa)
     
   
  0.657
Sdel_0054
Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (788 aa)
   
        0.657
Sdel_0165
TrmH family RNA methyltransferase (227 aa)
   
 
  0.613
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA (392 aa)
 
   
  0.580
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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