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Sdel_0065 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0065" - RNA-binding S4 domain-containing protein in Sulfurospirillum deleyianum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0065RNA-binding S4 domain-containing protein (261 aa)    
Predicted Functional Partners:
Sdel_0064
KpsF/GutQ family protein (321 aa)
   
        0.934
Sdel_0063
Beta-lactamase (664 aa)
   
        0.923
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (281 aa)
   
   
  0.914
Sdel_0066
ATPase AAA (396 aa)
   
   
  0.901
rlmN
Radical SAM enzyme, Cfr family; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity (358 aa)
 
      0.857
der
Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (477 aa)
 
   
  0.856
Sdel_0068
FlhB domain-containing protein (92 aa)
   
        0.768
Sdel_0067
Hypothetical protein (568 aa)
              0.731
Sdel_1632
Pseudouridylate synthase TruB domain-containing protein (275 aa)
 
   
  0.680
Sdel_1144
Methyltransferase (191 aa)
   
        0.664
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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