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Sdel_0076 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0076" - TrkA-N domain-containing protein in Sulfurospirillum deleyianum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0076TrkA-N domain-containing protein (562 aa)    
Predicted Functional Partners:
Sdel_0077
Hypothetical protein (125 aa)
 
          0.976
Sdel_0119
Aldo/keto reductase (339 aa)
     
    0.908
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (446 aa)
   
        0.626
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (150 aa)
              0.614
Sdel_0369
Hypothetical protein (158 aa)
   
          0.611
hisC
Histidinol-phosphate aminotransferase (366 aa)
     
      0.588
Sdel_1409
Hypothetical protein (581 aa)
     
      0.588
Sdel_1739
ATPase P (900 aa)
   
  0.580
Sdel_0064
KpsF/GutQ family protein (321 aa)
         
  0.572
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (91 aa)
              0.570
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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