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lspA protein (Sulfurospirillum deleyianum) - STRING interaction network
"lspA" - Lipoprotein signal peptidase in Sulfurospirillum deleyianum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lspALipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (150 aa)    
Predicted Functional Partners:
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate (446 aa)
     
 
  0.966
Sdel_0077
Hypothetical protein (125 aa)
 
          0.697
pheT
phenylalanyl-tRNA synthetase subunit beta (779 aa)
   
   
  0.640
Sdel_0844
Signal peptidase I (276 aa)
     
   
  0.637
Sdel_0558
DNA polymerase I (885 aa)
           
  0.631
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA (355 aa)
   
   
  0.617
rpsT
30S ribosomal protein S20; Binds directly to 16S ribosomal RNA (91 aa)
              0.614
Sdel_0076
TrkA-N domain-containing protein (562 aa)
              0.614
guaA
GMP synthase, large subunit; Catalyzes the synthesis of GMP from XMP (511 aa)
         
  0.568
Sdel_1389
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) (171 aa)
     
   
  0.568
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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