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Sdel_0101 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0101" - ABC transporter in Sulfurospirillum deleyianum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0101ABC transporter (244 aa)    
Predicted Functional Partners:
Sdel_0102
Hypothetical protein (376 aa)
 
 
  0.998
Sdel_0100
Hypothetical protein (316 aa)
 
  0.996
Sdel_0404
Toluene tolerance family protein (209 aa)
   
 
  0.889
Sdel_1023
ABC transporter (240 aa)
   
 
0.752
Sdel_1235
Response regulator receiver (222 aa)
   
          0.705
Sdel_0099
Hypothetical protein (198 aa)
 
          0.609
Sdel_0097
Response regulator receiver (222 aa)
 
          0.599
Sdel_1313
ABC transporter (193 aa)
 
   
    0.594
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP (204 aa)
   
          0.580
Sdel_0103
Hypothetical protein (279 aa)
              0.563
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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