STRINGSTRING
Sdel_0103 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0103" - Hypothetical protein in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0103Hypothetical protein (279 aa)    
Predicted Functional Partners:
Sdel_0102
Hypothetical protein (376 aa)
              0.563
Sdel_0101
ABC transporter (244 aa)
              0.563
Sdel_0100
Hypothetical protein (316 aa)
              0.561
Sdel_0104
Nitrogen regulatory protein P-II (112 aa)
              0.543
Sdel_0105
Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (172 aa)
              0.450
leuS
leucyl-tRNA synthetase (815 aa)
              0.442
Sdel_1513
Polynucleotide adenylyltransferase region (375 aa)
              0.442
secA
Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane (859 aa)
              0.442
prfB
Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA (364 aa)
              0.442
Sdel_0108
Extracellular ligand-binding receptor (388 aa)
              0.440
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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