Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Sdel_0113 | Sdel_0114 | Sdel_0113 | Sdel_0114 | Chemotaxis sensory transducer | Pyridoxal kinase | 0.504 |
Sdel_0113 | Sdel_0115 | Sdel_0113 | Sdel_0115 | Chemotaxis sensory transducer | Hypothetical protein | 0.416 |
Sdel_0114 | Sdel_0113 | Sdel_0114 | Sdel_0113 | Pyridoxal kinase | Chemotaxis sensory transducer | 0.504 |
Sdel_0114 | Sdel_0115 | Sdel_0114 | Sdel_0115 | Pyridoxal kinase | Hypothetical protein | 0.686 |
Sdel_0114 | Sdel_0316 | Sdel_0114 | Sdel_0316 | Pyridoxal kinase | Radical SAM protein | 0.442 |
Sdel_0114 | Sdel_0947 | Sdel_0114 | Sdel_0947 | Pyridoxal kinase | Metallophosphoesterase | 0.431 |
Sdel_0114 | Sdel_1642 | Sdel_0114 | Sdel_1642 | Pyridoxal kinase | Class I and II aminotransferase | 0.464 |
Sdel_0114 | pdxJ | Sdel_0114 | Sdel_1302 | Pyridoxal kinase | Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5’-phosphate (PNP) and inorganic phosphate | 0.912 |
Sdel_0114 | ung | Sdel_0114 | Sdel_0009 | Pyridoxal kinase | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine | 0.442 |
Sdel_0115 | Sdel_0113 | Sdel_0115 | Sdel_0113 | Hypothetical protein | Chemotaxis sensory transducer | 0.416 |
Sdel_0115 | Sdel_0114 | Sdel_0115 | Sdel_0114 | Hypothetical protein | Pyridoxal kinase | 0.686 |
Sdel_0316 | Sdel_0114 | Sdel_0316 | Sdel_0114 | Radical SAM protein | Pyridoxal kinase | 0.442 |
Sdel_0947 | Sdel_0114 | Sdel_0947 | Sdel_0114 | Metallophosphoesterase | Pyridoxal kinase | 0.431 |
Sdel_1642 | Sdel_0114 | Sdel_1642 | Sdel_0114 | Class I and II aminotransferase | Pyridoxal kinase | 0.464 |
pdxJ | Sdel_0114 | Sdel_1302 | Sdel_0114 | Pyridoxal phosphate biosynthetic protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5’-phosphate (PNP) and inorganic phosphate | Pyridoxal kinase | 0.912 |
ung | Sdel_0114 | Sdel_0009 | Sdel_0114 | uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine | Pyridoxal kinase | 0.442 |