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Sdel_0162 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0162" - Hypothetical protein in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0162Hypothetical protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (222 aa)    
Predicted Functional Partners:
Sdel_0161
Hypothetical protein (136 aa)
              0.877
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (270 aa)
   
   
  0.755
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (66 aa)
     
      0.663
Sdel_0160
MoeA domain-containing protein domain I and II (384 aa)
              0.650
Sdel_1091
Hypothetical protein (853 aa)
   
        0.583
Sdel_1392
Hypothetical protein (320 aa)
   
          0.575
prmA
50S ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11 (275 aa)
   
   
  0.568
Sdel_0848
Hypothetical protein (102 aa)
   
          0.565
Sdel_0535
FdhC protein (336 aa)
   
          0.563
Sdel_0309
Hypothetical protein (190 aa)
 
        0.562
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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