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Sdel_0170 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0170" - Hypothetical protein in Sulfurospirillum deleyianum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0170Hypothetical protein (108 aa)    
Predicted Functional Partners:
Sdel_0169
Homoserine dehydrogenase (423 aa)
              0.877
Sdel_0168
Class I and II aminotransferase (403 aa)
              0.877
Sdel_0167
Hypothetical protein (271 aa)
   
        0.847
Sdel_0165
TrmH family RNA methyltransferase (227 aa)
              0.847
Sdel_0166
Hypothetical protein (305 aa)
              0.844
rsmI
uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (270 aa)
   
        0.748
Sdel_0171
Thioredoxin (105 aa)
              0.723
rpmE
50S ribosomal protein L31; Binds the 23S rRNA (66 aa)
              0.615
Sdel_2161
Mg chelatase subunit ChlI (511 aa)
 
        0.568
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (694 aa)
              0.530
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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