STRINGSTRING
Sdel_0176 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0176" - Hypothetical protein in Sulfurospirillum deleyianum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0176Hypothetical protein (178 aa)    
Predicted Functional Partners:
hisI
phosphoribosyl-ATP diphosphatase (227 aa)
              0.917
Sdel_0179
Hypothetical protein (363 aa)
              0.850
Sdel_0177
Hypothetical protein (179 aa)
              0.844
Sdel_0180
Branched-chain amino acid aminotransferase (304 aa)
              0.812
Sdel_0181
Peroxiredoxin (154 aa)
              0.569
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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