STRINGSTRING
Sdel_0179 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0179" - Hypothetical protein in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0179Hypothetical protein (363 aa)    
Predicted Functional Partners:
hisI
phosphoribosyl-ATP diphosphatase (227 aa)
   
        0.931
Sdel_0180
Branched-chain amino acid aminotransferase (304 aa)
   
        0.895
Sdel_0177
Hypothetical protein (179 aa)
              0.867
Sdel_0176
Hypothetical protein (178 aa)
              0.850
ftsH
ATP-dependent metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins (643 aa)
   
 
  0.757
Sdel_0249
Ribosome-binding factor A; Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Essential for efficient processing of 16S rRNA. May interact with the 5’-terminal helix region of 16S rRNA (125 aa)
   
          0.755
Sdel_1618
Hypothetical protein (171 aa)
   
          0.750
Sdel_0846
Hypothetical protein (110 aa)
 
          0.739
Sdel_0190
Hypothetical protein (146 aa)
   
          0.738
Sdel_0666
OstA family protein (154 aa)
   
          0.736
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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