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Sdel_0180 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0180" - Branched-chain amino acid aminotransferase in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0180Branched-chain amino acid aminotransferase (304 aa)    
Predicted Functional Partners:
ilvD
Dihydroxy-acid dehydratase (559 aa)
   
  0.986
hisI
phosphoribosyl-ATP diphosphatase (227 aa)
   
   
  0.967
leuA
2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) (520 aa)
   
  0.965
Sdel_1014
Threonine dehydratase (403 aa)
   
 
  0.949
Sdel_0169
Homoserine dehydrogenase (423 aa)
   
  0.915
panB
3-methyl-2-oxobutanoatehydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (278 aa)
         
  0.911
Sdel_0179
Hypothetical protein (363 aa)
   
        0.895
Sdel_0325
Lactate/malate dehydrogenase (309 aa)
   
 
  0.855
thrB
Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate (294 aa)
   
 
  0.852
ilvC
Ketol-acid reductoisomerase (340 aa)
   
 
  0.846
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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