greA protein (Sulfurospirillum deleyianum) - STRING interaction network

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greA

Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides (167 aa)

Predicted Functional Partners:

Sdel_0203

0.902

argC

0.879

Sdel_0204

0.859

rpoC

0.854

Sdel_0205

0.853

Sdel_0200

0.826

Sdel_0206

0.823

rpoA

0.815

rpoB

0.735

rpoZ

0.729

Your Current Organism:

Sulfurospirillum deleyianum

NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Sdel_0200	Sdel_0203	Sdel_0200	Sdel_0203	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Hypothetical protein	0.979
Sdel_0200	Sdel_0204	Sdel_0200	Sdel_0204	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	CheW domain-containing protein	0.790
Sdel_0200	Sdel_0205	Sdel_0200	Sdel_0205	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	CheW domain-containing protein	0.778
Sdel_0200	Sdel_0206	Sdel_0200	Sdel_0206	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	CheW domain-containing protein	0.726
Sdel_0200	argC	Sdel_0200	Sdel_0202	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	N-acetyl-gamma-glutamyl-phosphate reductase	0.768
Sdel_0200	greA	Sdel_0200	Sdel_0201	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides	0.826
Sdel_0203	Sdel_0200	Sdel_0203	Sdel_0200	Hypothetical protein	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.979
Sdel_0203	Sdel_0204	Sdel_0203	Sdel_0204	Hypothetical protein	CheW domain-containing protein	0.904
Sdel_0203	Sdel_0205	Sdel_0203	Sdel_0205	Hypothetical protein	CheW domain-containing protein	0.920
Sdel_0203	Sdel_0206	Sdel_0203	Sdel_0206	Hypothetical protein	CheW domain-containing protein	0.859
Sdel_0203	argC	Sdel_0203	Sdel_0202	Hypothetical protein	N-acetyl-gamma-glutamyl-phosphate reductase	0.902
Sdel_0203	greA	Sdel_0203	Sdel_0201	Hypothetical protein	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides	0.902
Sdel_0204	Sdel_0200	Sdel_0204	Sdel_0200	CheW domain-containing protein	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.790
Sdel_0204	Sdel_0203	Sdel_0204	Sdel_0203	CheW domain-containing protein	Hypothetical protein	0.904
Sdel_0204	Sdel_0205	Sdel_0204	Sdel_0205	CheW domain-containing protein	CheW domain-containing protein	0.999
Sdel_0204	Sdel_0206	Sdel_0204	Sdel_0206	CheW domain-containing protein	CheW domain-containing protein	0.991
Sdel_0204	argC	Sdel_0204	Sdel_0202	CheW domain-containing protein	N-acetyl-gamma-glutamyl-phosphate reductase	0.887
Sdel_0204	greA	Sdel_0204	Sdel_0201	CheW domain-containing protein	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreA releases sequences of 2 to 3 nucleotides	0.859
Sdel_0204	rpoB	Sdel_0204	Sdel_0353	CheW domain-containing protein	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates	0.660
Sdel_0205	Sdel_0200	Sdel_0205	Sdel_0200	CheW domain-containing protein	lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell	0.778

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