STRINGSTRING
Sdel_0210 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0210" - Twitching motility protein in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0210Twitching motility protein (399 aa)    
Predicted Functional Partners:
Sdel_1126
Peptidase A24A domain-containing protein (243 aa)
 
   
  0.939
Sdel_1040
Type II secretion system F domain-containing protein (413 aa)
 
   
  0.936
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway (331 aa)
              0.862
Sdel_0208
Phosphoserine phosphatase SerB (206 aa)
              0.790
Sdel_0204
CheW domain-containing protein (316 aa)
   
   
  0.744
Sdel_1039
Type II secretion system protein E (583 aa)
 
   
0.664
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis (191 aa)
              0.659
Sdel_0213
Permease YjgP/YjgQ family protein (353 aa)
              0.658
ctc
Ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (178 aa)
              0.658
Sdel_0205
CheW domain-containing protein (774 aa)
   
   
  0.635
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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