STRINGSTRING
Sdel_0260 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0260" - Hypothetical protein in Sulfurospirillum deleyianum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0260Hypothetical protein (115 aa)    
Predicted Functional Partners:
Sdel_0261
Radical SAM protein (564 aa)
              0.859
Sdel_0258
Hypothetical protein (295 aa)
 
          0.751
Sdel_2087
Outer membrane porin (452 aa)
    
          0.732
Sdel_0697
NosL family protein (350 aa)
    
          0.722
Sdel_0259
Cytochrome C class I (331 aa)
 
          0.715
Sdel_0469
Outer membrane porin (432 aa)
    
          0.708
Sdel_0366
Outer membrane porin (403 aa)
    
          0.689
Sdel_0019
Outer membrane porin (402 aa)
    
          0.684
Sdel_0715
Outer membrane porin (451 aa)
    
          0.671
Sdel_2169
Hypothetical protein (378 aa)
    
          0.669
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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