STRINGSTRING
Sdel_0268 protein (Sulfurospirillum deleyianum) - STRING interaction network
"Sdel_0268" - Diguanylate cyclase in Sulfurospirillum deleyianum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0268Diguanylate cyclase (933 aa)    
Predicted Functional Partners:
Sdel_0272
Response regulator receiver (223 aa)
   
 
  0.938
Sdel_1821
Diguanylate cyclase (821 aa)
 
 
  0.901
Sdel_0205
CheW domain-containing protein (774 aa)
   
 
  0.875
Sdel_1063
Diguanylate cyclase (458 aa)
 
  0.871
Sdel_0269
Nitrate reductase (754 aa)
         
  0.863
Sdel_0273
ATP-binding region ATPase domain-containing protein (393 aa)
   
   
  0.859
Sdel_0270
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (188 aa)
         
  0.838
Sdel_0274
Hypothetical protein (282 aa)
              0.837
Sdel_0271
Polysulfide reductase NrfD (322 aa)
              0.837
Sdel_1494
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.820
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: Dehalospirillum, Dehalospirillum Scholz-Muramatsu et al. 2002, Geospirillum, S. deleyianum, S. deleyianum DSM 6946, Sulfurospirillum, Sulfurospirillum deleyianum, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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