STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_0325PFAM: Lactate/malate dehydrogenase; KEGG: vpa:VPA0147 lactate dehydrogenase; Belongs to the LDH/MDH superfamily. (309 aa)    
Predicted Functional Partners:
Sdel_1898
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; Pyruvate-flavodoxin oxidoreductase, EKR domain; KEGG: cco:CCC13826_1933 pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 0.992
Sdel_1083
PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cla:Cla_0816 2-oxoglutarate:acceptor oxidoreductase, OorA subunit.
  
 
 0.967
Sdel_0501
Pyruvate kinase; KEGG: cff:CFF8240_0630 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; Belongs to the pyruvate kinase family.
  
 0.965
Sdel_0604
PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; KEGG: cco:CCC13826_1508 glyceraldehyde-3-phosphate dehydrogenase 2.
    
 0.946
Sdel_1082
PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: cff:CFF8240_0907 2-oxoglutarate-acceptor oxidoreductase subunit OorB.
  
 
 0.943
Sdel_2195
Malate dehydrogenase (oxaloacetate- decarboxylating) (NADP(+)); PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: ccv:CCV52592_0547 malic enzyme NAD binding subunit.
  
 0.931
Sdel_1291
PFAM: aminotransferase class I and II; KEGG: nis:NIS_0815 aspartate aminotransferase.
  
 0.914
Sdel_0972
Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.
  
 
 0.913
Sdel_1277
PFAM: Protein of unknown function DUF2088; KEGG: wsu:WS0140 hypothetical protein.
     
 0.909
Sdel_1847
PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; RimK domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: abu:Abu_0605 acetyl CoA carboxylase, biotin carboxylase subunit.
    
 0.909
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.