STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1481KEGG: cha:CHAB381_0226 hypothetical protein. (584 aa)    
Predicted Functional Partners:
Sdel_1482
PFAM: protein of unknown function DUF839; KEGG: cha:CHAB381_0225 alkaline phosphatase.
 
     0.897
Sdel_1480
PFAM: high-affinity nickel-transporter; KEGG: wsu:WS0271 hypothetical protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
     
 0.774
Sdel_1478
Hypothetical protein.
       0.732
Sdel_1479
KEGG: rec:RHECIAT_PB0000076 hypothetical protein.
       0.732
Sdel_1217
PFAM: OmpA/MotB domain protein; KEGG: ccv:CCV52592_0111 putative chemotaxis protein MotB.
  
 
 0.720
pal
OmpA/MotB domain protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.681
Sdel_0522
PFAM: Tetratricopeptide TPR_2 repeat protein; KEGG: cjd:JJD26997_0121 hypothetical protein.
  
  
 0.671
Sdel_1901
PFAM: OmpA/MotB domain protein; KEGG: ccv:CCV52592_0913 outer membrane fibronectin- binding protein.
  
 
 0.648
Sdel_0419
PFAM: Di-haem cytochrome c peroxidase; KEGG: abu:Abu_2140 cytochrome c551 peroxidase.
  
 
 0.574
Sdel_0369
KEGG: dar:Daro_1576 hypothetical protein.
  
     0.562
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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