Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Sdel_1001 | Sdel_1492 | PFAM: glycosyl transferase family 2; KEGG: geo:Geob_2957 glycosyl transferase family 2. | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | 0.495 |
Sdel_1251 | Sdel_1492 | PFAM: glycosyl transferase family 2; KEGG: hde:HDEF_0188 glycosyltransferase group 2. | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | 0.489 |
Sdel_1491 | Sdel_1492 | PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS1520 methyl-accepting chemotaxis protein. | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | 0.449 |
Sdel_1492 | Sdel_1001 | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | PFAM: glycosyl transferase family 2; KEGG: geo:Geob_2957 glycosyl transferase family 2. | 0.495 |
Sdel_1492 | Sdel_1251 | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | PFAM: glycosyl transferase family 2; KEGG: hde:HDEF_0188 glycosyltransferase group 2. | 0.489 |
Sdel_1492 | Sdel_1491 | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: wsu:WS1520 methyl-accepting chemotaxis protein. | 0.449 |
Sdel_1492 | Sdel_1493 | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: wsu:WS0410 ammonium transporter. | 0.520 |
Sdel_1492 | Sdel_1494 | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | PFAM: nitrogen regulatory protein P-II; KEGG: tdn:Suden_0642 nitrogen regulatory protein P- II (GlnB, GlnK); Belongs to the P(II) protein family. | 0.493 |
Sdel_1492 | Sdel_2037 | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | PFAM: sulfatase; protein of unknown function DUF1705; KEGG: wsu:WS0643 hypothetical protein. | 0.414 |
Sdel_1493 | Sdel_1492 | TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: wsu:WS0410 ammonium transporter. | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | 0.520 |
Sdel_1493 | Sdel_1494 | TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: wsu:WS0410 ammonium transporter. | PFAM: nitrogen regulatory protein P-II; KEGG: tdn:Suden_0642 nitrogen regulatory protein P- II (GlnB, GlnK); Belongs to the P(II) protein family. | 0.999 |
Sdel_1494 | Sdel_1492 | PFAM: nitrogen regulatory protein P-II; KEGG: tdn:Suden_0642 nitrogen regulatory protein P- II (GlnB, GlnK); Belongs to the P(II) protein family. | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | 0.493 |
Sdel_1494 | Sdel_1493 | PFAM: nitrogen regulatory protein P-II; KEGG: tdn:Suden_0642 nitrogen regulatory protein P- II (GlnB, GlnK); Belongs to the P(II) protein family. | TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: wsu:WS0410 ammonium transporter. | 0.999 |
Sdel_2037 | Sdel_1492 | PFAM: sulfatase; protein of unknown function DUF1705; KEGG: wsu:WS0643 hypothetical protein. | Phosphatidylglycerol--membrane-oligosaccharidegl ycerophosphotransferase; PFAM: sulfatase; KEGG: spe:Spro_3126 phosphoglycerol transferase I. | 0.414 |