STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1868PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; KEGG: wsu:WS1836 hydrogenase-Ni,Fe-hydrogenase III small subunit. (274 aa)    
Predicted Functional Partners:
Sdel_1866
PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: wsu:WS1838 hydrogenase 4 subunit.
 
 0.999
Sdel_1863
PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: wsu:WS1841 hydrogenase-4 component C.
 
 
 0.996
Sdel_1865
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wsu:WS1839 hydrogenase 4 membrane subunit.
 
 
 0.987
Sdel_1862
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: wsu:WS1842 hydrogenase 4 membrane subunit.
 
 
 0.986
Sdel_1867
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS1837 formate hydrogenlyase complex iron- sulfur subunit.
 
 
 0.983
Sdel_1197
NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase chain 49kDa; KEGG: nam:NAMH_1057 carbon monoxide-induced hydrogenase, large subunit.
 
 0.982
Sdel_1864
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: wsu:WS1840 hydrogenase 4 membrane subunit.
 
  
 0.974
Sdel_1870
TIGRFAM: hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: wsu:WS1834 hypothetical protein.
 
  
 0.949
Sdel_1861
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: wsu:WS1843 hydrogenase-3 small subunit.
 
 0.890
Sdel_1869
KEGG: wsu:WS1835 hypothetical protein.
       0.809
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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