STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sdel_1875PFAM: thioesterase superfamily protein; KEGG: cla:Cla_1269 conserved hypothetical protein, putative acyl-coA thioester hydrolase. (139 aa)    
Predicted Functional Partners:
Sdel_1873
PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: tdn:Suden_1559 two component transcriptional regulator.
       0.675
Sdel_1874
PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: tdn:Suden_1558 histidine kinase.
       0.675
Sdel_1872
PFAM: PhoU family protein; KEGG: nis:NIS_0581 phosphate transport system regulator.
       0.651
Sdel_1871
PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: abu:Abu_0406 phospholipid/glycerol acyltransferase, hemolysin.
       0.411
Your Current Organism:
Sulfurospirillum deleyianum
NCBI taxonomy Id: 525898
Other names: S. deleyianum DSM 6946, Sulfurospirillum deleyianum DSM 6946, Sulfurospirillum deleyianum str. DSM 6946, Sulfurospirillum deleyianum strain DSM 6946
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