STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA19581.1Transcriptional regulator, ArsR family. (123 aa)    
Predicted Functional Partners:
SEB13433.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.641
SEB08323.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
  
 0.627
SEA19536.1
Hypothetical protein.
       0.550
SEA86700.1
Sodium/proton antiporter, NhaD family (TC 2.A.62).
  
  
 0.519
SEB13409.1
Hypothetical protein.
 
  
 0.508
SEA34253.1
Amino acid adenylation domain-containing protein; Belongs to the ATP-dependent AMP-binding enzyme family.
     
 0.435
SEA00944.1
Uncharacterized conserved protein YndB, AHSA1/START domain.
 
    0.431
SEA92074.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
     
 0.431
SEB13402.1
Small redox-active disulfide protein 2.
 
   
 0.420
Your Current Organism:
Thiothrix caldifontis
NCBI taxonomy Id: 525918
Other names: DSM 21228, T. caldifontis, Thiothrix caldifontis Chernousova et al. 2009, VKM B-2520, strain G1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.