STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIQ33388.1Peptide/nickel transport system substrate-binding protein. (547 aa)    
Predicted Functional Partners:
SIQ33425.1
Peptide/nickel transport system permease protein.
 0.987
SIQ33461.1
Peptide/nickel transport system permease protein.
 
 0.987
SIQ69985.1
Peptide/nickel transport system permease protein.
 0.949
SIQ69955.1
Peptide/nickel transport system permease protein.
 
 0.947
SIQ33526.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.941
SIQ33494.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.935
SIQ77745.1
Peptide/nickel transport system permease protein.
 
 0.845
SIQ81806.1
Peptide/nickel transport system permease protein.
 
 0.841
SIQ81838.1
Peptide/nickel transport system permease protein.
 0.826
SIQ69903.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.811
Your Current Organism:
Acidiphilium rubrum
NCBI taxonomy Id: 526
Other names: A. rubrum, ATCC 35905, Acidiphilum rubrum, strain OP
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.