STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VDBG_05053Glycerol-3-phosphate dehydrogenase [NAD(+)]. (366 aa)    
Predicted Functional Partners:
VDBG_05806
Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
   
 0.990
VDBG_08044
Glycerol-3-phosphate O-acyltransferase.
    
  0.948
VDBG_09383
Uncharacterized protein.
    
 0.921
VDBG_02579
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
 0.920
VDBG_09489
Lysocardiolipin acyltransferase.
    
 0.919
VDBG_08372
Glycerol-3-phosphate acyltransferase.
    
 0.905
VDBG_08629
Membrane-bound O-acyltransferase domain-containing protein; Belongs to the membrane-bound acyltransferase family.
     
 0.826
VDBG_03321
Lipid phosphate phosphatase.
    
 0.823
VDBG_10008
Diacylglycerol pyrophosphate phosphatase.
    
 0.823
VDBG_07233
Nuclear elongation and deformation protein.
     
 0.821
Your Current Organism:
Verticillium alfalfae
NCBI taxonomy Id: 526221
Other names: V. alfalfae VaMs.102, Verticillium alfalfae VaMs.102
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.