Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| VDBG_01574 | VDBG_01708 | C9SAL7 | C9SB49 | 60S ribosomal protein L26-1. | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 0.821 |
| VDBG_01574 | VDBG_03905 | C9SAL7 | C9SF10 | 60S ribosomal protein L26-1. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.821 |
| VDBG_01574 | VDBG_04277 | C9SAL7 | C9SGS4 | 60S ribosomal protein L26-1. | 60S ribosomal protein L5. | 0.999 |
| VDBG_01574 | VDBG_04817 | C9SAL7 | C9SID5 | 60S ribosomal protein L26-1. | 60S ribosomal protein L35. | 0.999 |
| VDBG_01574 | VDBG_06157 | C9SAL7 | C9SMN3 | 60S ribosomal protein L26-1. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.999 |
| VDBG_01574 | VDBG_06178 | C9SAL7 | C9SMQ4 | 60S ribosomal protein L26-1. | Predicted protein. | 0.821 |
| VDBG_01574 | VDBG_06906 | C9SAL7 | C9SPT1 | 60S ribosomal protein L26-1. | 60S ribosomal protein L7. | 0.999 |
| VDBG_01574 | VDBG_08644 | C9SAL7 | C9SUR9 | 60S ribosomal protein L26-1. | 60S ribosomal protein L23a. | 0.999 |
| VDBG_01574 | VDBG_08717 | C9SAL7 | C9SUZ2 | 60S ribosomal protein L26-1. | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.999 |
| VDBG_01708 | VDBG_01574 | C9SB49 | C9SAL7 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 60S ribosomal protein L26-1. | 0.821 |
| VDBG_01708 | VDBG_03905 | C9SB49 | C9SF10 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 0.800 |
| VDBG_01708 | VDBG_04277 | C9SB49 | C9SGS4 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 60S ribosomal protein L5. | 0.835 |
| VDBG_01708 | VDBG_04817 | C9SB49 | C9SID5 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 60S ribosomal protein L35. | 0.839 |
| VDBG_01708 | VDBG_06157 | C9SB49 | C9SMN3 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.762 |
| VDBG_01708 | VDBG_06178 | C9SB49 | C9SMQ4 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | Predicted protein. | 0.690 |
| VDBG_01708 | VDBG_06681 | C9SB49 | C9SP56 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | Multifunctional tryptophan biosynthesis protein; Trifunctional enzyme bearing the Gln amidotransferase (GATase) domain of anthranilate synthase, indole-glycerolphosphate synthase, and phosphoribosylanthranilate isomerase activities. | 0.718 |
| VDBG_01708 | VDBG_06906 | C9SB49 | C9SPT1 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 60S ribosomal protein L7. | 0.852 |
| VDBG_01708 | VDBG_08644 | C9SB49 | C9SUR9 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 60S ribosomal protein L23a. | 0.794 |
| VDBG_01708 | VDBG_08717 | C9SB49 | C9SUZ2 | Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val); Belongs to the peptidase M24A family. Methionine aminopeptidase eukaryotic type 2 subfamily. | 40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. | 0.798 |
| VDBG_03905 | VDBG_01574 | C9SF10 | C9SAL7 | Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). | 60S ribosomal protein L26-1. | 0.821 |
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