Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
VDBG_01542 | VDBG_01731 | C9SAI5 | C9SB72 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.927 |
VDBG_01542 | VDBG_06650 | C9SAI5 | C9SP25 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | NAD-specific glutamate dehydrogenase. | 0.834 |
VDBG_01542 | VDBG_08373 | C9SAI5 | C9STV2 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | Pantothenate synthetase. | 0.902 |
VDBG_01542 | VDBG_08737 | C9SAI5 | C9SV12 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.935 |
VDBG_01542 | VDBG_09333 | C9SAI5 | C9SX33 | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.935 |
VDBG_01731 | VDBG_01542 | C9SB72 | C9SAI5 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
VDBG_01731 | VDBG_02594 | C9SB72 | C9SE76 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aldehyde dehydrogenase. | 0.927 |
VDBG_01731 | VDBG_03953 | C9SB72 | C9SF58 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
VDBG_01731 | VDBG_05141 | C9SB72 | C9SK14 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
VDBG_01731 | VDBG_06650 | C9SB72 | C9SP25 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | NAD-specific glutamate dehydrogenase. | 0.964 |
VDBG_01731 | VDBG_08373 | C9SB72 | C9STV2 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Pantothenate synthetase. | 0.933 |
VDBG_01731 | VDBG_08711 | C9SB72 | C9SUY6 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
VDBG_01731 | VDBG_08737 | C9SB72 | C9SV12 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.965 |
VDBG_01731 | VDBG_09176 | C9SB72 | C9SWA1 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. | 0.927 |
VDBG_01731 | VDBG_09333 | C9SB72 | C9SX33 | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.965 |
VDBG_02594 | VDBG_01731 | C9SE76 | C9SB72 | Aldehyde dehydrogenase. | Glutamate decarboxylase; Belongs to the group II decarboxylase family. | 0.927 |
VDBG_02594 | VDBG_06650 | C9SE76 | C9SP25 | Aldehyde dehydrogenase. | NAD-specific glutamate dehydrogenase. | 0.834 |
VDBG_02594 | VDBG_08373 | C9SE76 | C9STV2 | Aldehyde dehydrogenase. | Pantothenate synthetase. | 0.902 |
VDBG_02594 | VDBG_08737 | C9SE76 | C9SV12 | Aldehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.935 |
VDBG_02594 | VDBG_09333 | C9SE76 | C9SX33 | Aldehyde dehydrogenase. | 4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.935 |
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