STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80132.1TIGRFAM: type I secretion membrane fusion protein, HlyD family; PFAM: secretion protein HlyD family protein; KEGG: hch:HCH_06116 membrane-fusion protein. (471 aa)    
Predicted Functional Partners:
ACS80133.1
Type I secretion system ATPase; KEGG: hch:HCH_06117 bacteriocin/lantibiotic ABC transporter; TIGRFAM: type I secretion system ATPase; PFAM: ABC transporter related; peptidase C39 bacteriocin processing; ABC transporter transmembrane region; SMART: AAA ATPase.
 
 
 0.981
ACS80139.1
PFAM: ABC transporter transmembrane region; KEGG: cbd:CBUD_2135 multidrug resistance ABC transporter ATP-binding and permease protein.
 
 
 0.920
ACS80269.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lpc:LPC_0935 toxin secretion ATP binding protein.
 
 
 0.919
ACS80138.1
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cbd:CBUD_2136 type I protein secretion ATP-binding protein.
 
 0.915
ACS80134.1
KEGG: swp:swp_1383 hemolysin-type calcium-binding region.
 
  
 0.900
ACS80909.1
PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bbr:BB1189 ABC transporter.
 
 0.892
ACS80910.1
PFAM: outer membrane efflux protein; KEGG: asa:ASA_1671 type I secretion outer membrane protein, TolC.
 
 
 0.812
ACS80266.1
PFAM: outer membrane efflux protein; KEGG: bac:BamMC406_6073 TolC family type I secretion outer membrane protein.
 
 
 0.808
ACS78859.1
PFAM: Hemolysin-type calcium-binding region; KEGG: bja:bll7673 hypothetical protein.
 
  
 0.742
ACS79737.1
PFAM: outer membrane efflux protein; KEGG: pin:Ping_3184 outer membrane efflux protein.
 
 
 0.740
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.