STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACS80607.1PFAM: inner-membrane translocator; KEGG: vpa:VPA1085 ribose ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (322 aa)    
Predicted Functional Partners:
ACS80606.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: vpa:VPA1084 D-ribose transporter subunit RbsB.
 0.999
rbsA
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.999
ACS79028.1
KEGG: scl:sce3322 put. D-ribose-binding periplasmic protein.
 0.992
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.992
ACS81349.1
KEGG: dde:Dde_3311 ABC-type sugar transport system, periplasmic component.
 
 
 0.934
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.922
ACS78376.1
KEGG: hch:HCH_00210 ABC-type sugar transport system, periplasmic component.
 
 
 0.876
ACS80604.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: ppr:PBPRB1561 putative ribose operon repressor, RbsR.
 
  
 0.831
ACS78567.1
PFAM: PfkB domain protein; KEGG: dde:Dde_2522 putative fructokinase.
 
  
 0.573
ACS78410.1
PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: bph:Bphy_7452 LacI family transcription regulator.
 
  
 0.558
Your Current Organism:
Desulfovibrio salexigens
NCBI taxonomy Id: 526222
Other names: D. salexigens DSM 2638, Desulfovibrio salexigens ATCC 14822, Desulfovibrio salexigens DSM 2638, Desulfovibrio salexigens str. DSM 2638, Desulfovibrio salexigens strain DSM 2638
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.