STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_1529KEGG: bhy:BHWA1_01978 hypothetical protein. (394 aa)    
Predicted Functional Partners:
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.999
Bmur_0025
KEGG: ppd:Ppro_0172 ATPase central domain- containing protein; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase.
   
 0.981
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
   
 0.979
Bmur_1587
KEGG: bhy:BHWA1_01521 hypothetical protein.
  
 0.976
Bmur_0141
KEGG: bhy:BHWA1_00462 putative dynein heavy chain.
  
 0.951
Bmur_0014
KEGG: bhy:BHWA1_00368 hypothetical protein.
   
 0.900
Bmur_0915
Multi-sensor signal transduction histidine kinase; KEGG: bhy:BHWA1_01271 hypothetical protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; SMART: ATP-binding region ATPase domain protein.
 
 
 0.876
Bmur_0754
PFAM: Ankyrin; KEGG: bhy:BHWA1_01195 hypothetical protein.
  
 0.871
Bmur_1261
KEGG: bhy:BHWA1_01595 TPR domain-containing protein; PFAM: Tetratricopeptide TPR_2 repeat protein; Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein; Tetratricopeptide repeat.
 
 
 0.859
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.850
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.