STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bmur_2647PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: bhy:BHWA1_00061 aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS S. (162 aa)    
Predicted Functional Partners:
Bmur_2646
PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: bhy:BHWA1_00060 aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM S.
 
 0.999
Bmur_2648
PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: bhy:BHWA1_00062 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL S.
 
 0.999
Bmur_2657
Selenium-dependent molybdenum hydroxylase 1; KEGG: bhy:BHWA1_00070 aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL S; TIGRFAM: selenium-dependent molybdenum hydroxylase 1; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; ferredoxin; [2Fe-2S]-binding domain protein; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead.
 
 
0.896
Bmur_0325
KEGG: bhy:BHWA1_00526 putative dehydrogenase accessory protein.
 
  
 0.835
Bmur_2641
KEGG: bhy:BHWA1_00058 MobA-related protein.
 
  
 0.679
Bmur_2645
KEGG: bhy:BHWA1_00059 xanthine/uracil permease; TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease.
  
  
 0.677
Your Current Organism:
Brachyspira murdochii
NCBI taxonomy Id: 526224
Other names: B. murdochii DSM 12563, Brachyspira murdochii 56-150, Brachyspira murdochii ATCC 51284, Brachyspira murdochii CIP 105832, Brachyspira murdochii DSM 12563, Brachyspira murdochii str. DSM 12563, Brachyspira murdochii strain DSM 12563
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.