STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gobs_0843PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: nca:Noca_4910 hypothetical protein. (276 aa)    
Predicted Functional Partners:
Gobs_0844
PFAM: protein of unknown function DUF1326; KEGG: nca:Noca_4909 hypothetical protein.
 
     0.961
Gobs_0845
KEGG: ddr:Deide_12540 putative ferredoxin--NADP(+) reductase (NADPH:adrenodoxin oxidoreductase).
       0.574
Gobs_2322
KEGG: mva:Mvan_4767 hypothetical protein.
  
     0.560
Gobs_3744
KEGG: mjl:Mjls_2385 hypothetical protein.
  
     0.546
Gobs_3807
KEGG: mbt:JTY_2575 hypothetical protein.
  
     0.529
Gobs_3808
KEGG: mbt:JTY_2574 hypothetical protein.
  
     0.517
Gobs_0846
PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mjl:Mjls_2107 antibiotic biosynthesis monooxygenase.
       0.424
Gobs_0406
PFAM: polysaccharide biosynthesis protein; KEGG: mlu:Mlut_05840 membrane protein involved in the export of O-antigen and teichoic acid.
  
     0.418
Your Current Organism:
Geodermatophilus obscurus
NCBI taxonomy Id: 526225
Other names: G. obscurus DSM 43160, Geodermatophilus obscurus ATCC 25078, Geodermatophilus obscurus DSM 43160, Geodermatophilus obscurus IFO 13315, Geodermatophilus obscurus JCM 3152, Geodermatophilus obscurus NBRC 13315, Geodermatophilus obscurus NRRL B-3577, Geodermatophilus obscurus VKM Ac-658, Geodermatophilus obscurus str. DSM 43160, Geodermatophilus obscurus strain DSM 43160
Server load: low (28%) [HD]