Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Gobs_0041 | Gobs_0116 | FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain-containing protein. | KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...] | 0.819 |
Gobs_0041 | Gobs_1219 | FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain-containing protein. | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | 0.442 |
Gobs_0116 | Gobs_0041 | KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...] | FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain-containing protein. | 0.819 |
Gobs_0116 | Gobs_1219 | KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...] | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | 0.577 |
Gobs_0116 | Gobs_1220 | KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...] | KEGG: dra:DR_A0146 hypothetical protein. | 0.577 |
Gobs_0786 | Gobs_1219 | PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: ach:Achl_2865 fibronectin type III domain protein. | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | 0.413 |
Gobs_1219 | Gobs_0041 | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain-containing protein. | 0.442 |
Gobs_1219 | Gobs_0116 | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...] | 0.577 |
Gobs_1219 | Gobs_0786 | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: ach:Achl_2865 fibronectin type III domain protein. | 0.413 |
Gobs_1219 | Gobs_1220 | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | KEGG: dra:DR_A0146 hypothetical protein. | 0.806 |
Gobs_1219 | Gobs_4162 | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr2886 hypothetical protein. | 0.431 |
Gobs_1220 | Gobs_0116 | KEGG: dra:DR_A0146 hypothetical protein. | KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing prot [...] | 0.577 |
Gobs_1220 | Gobs_1219 | KEGG: dra:DR_A0146 hypothetical protein. | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | 0.806 |
Gobs_4162 | Gobs_1219 | PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr2886 hypothetical protein. | PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase. | 0.431 |