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Gbro_1888 protein (Gordonia bronchialis) - STRING interaction network
"Gbro_1888" - TIGRFAM: drug resistance transporter, EmrB/QacA subfamily in Gordonia bronchialis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
Gbro_1888TIGRFAM- drug resistance transporter, EmrB/QacA subfamily; PFAM- major facilitator superfamily MFS_1; KEGG- oan-Oant_3227 EmrB/QacA family drug resistance transporter (505 aa)    
Predicted Functional Partners:
Gbro_1887
PFAM- transcriptional regulator PadR family protein; KEGG- bcj-BCAL0053 PadR family regulatory protein (232 aa)
              0.849
Gbro_1885
KEGG- scl-sce6151 hypothetical protein (243 aa)
   
      0.643
Gbro_1890
KEGG- afw-Anae109_2144 DNA repair exonuclease, SbcC (989 aa)
   
        0.610
Gbro_1886
KEGG- tgr-Tgr7_0702 putative glutathione S- transferase (348 aa)
   
        0.603
sbcD
Nuclease SbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (407 aa)
              0.598
Gbro_1884
PFAM- ABC transporter related; ABC transporter transmembrane region; SMART- AAA ATPase; KEGG- see-SNSL254_A2969 ATP binding cassette (1332 aa)
   
   
  0.560
Gbro_1883
TIGRFAM- 2-oxoglutarate dehydrogenase, E1 subunit; PFAM- Transketolase central region; dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; KEGG- sfu-Sfum_3547 alpha-ketoglutarate decarboxylase (1308 aa)
   
   
  0.404
Your Current Organism:
Gordonia bronchialis
NCBI taxonomy Id: 526226
Other names: G. bronchialis DSM 43247, Gordonia bronchialis, Gordonia bronchialis ATCC 25592, Gordonia bronchialis CCUG 20989, Gordonia bronchialis CCUG 34956, Gordonia bronchialis CIP 100847, Gordonia bronchialis DSM 43247, Gordonia bronchialis DSM43247, Gordonia bronchialis IFO 6047, Gordonia bronchialis JCM 3198, Gordonia bronchialis JCM 3231, Gordonia bronchialis LMG 5355, Gordonia bronchialis NBRC 16047, Gordonia bronchialis NCTC 10667, Gordonia bronchialis VKM Ac-956, Gordonia bronchialis str. DSM 43247, Gordonia bronchialis str. Tsukamura 3410, Gordonia bronchialis strain DSM 43247
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