Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Gbro_2039 | Gbro_2440 | Gbro_2039 | Gbro_2440 | PFAM: DSBA oxidoreductase. | Hypothetical protein. | 0.403 |
Gbro_2039 | Gbro_2441 | Gbro_2039 | Gbro_2441 | PFAM: DSBA oxidoreductase. | Hypothetical protein. | 0.400 |
Gbro_2039 | mshA | Gbro_2039 | Gbro_0989 | PFAM: DSBA oxidoreductase. | UDP-N-acetylglucosamine; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.582 |
Gbro_2039 | mshB | Gbro_2039 | Gbro_3329 | PFAM: DSBA oxidoreductase. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.699 |
Gbro_2039 | mshC | Gbro_2039 | Gbro_2442 | PFAM: DSBA oxidoreductase. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.683 |
Gbro_2039 | mshD | Gbro_2039 | Gbro_3934 | PFAM: DSBA oxidoreductase. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.792 |
Gbro_2440 | Gbro_2039 | Gbro_2440 | Gbro_2039 | Hypothetical protein. | PFAM: DSBA oxidoreductase. | 0.403 |
Gbro_2440 | Gbro_2441 | Gbro_2440 | Gbro_2441 | Hypothetical protein. | Hypothetical protein. | 0.959 |
Gbro_2440 | mshA | Gbro_2440 | Gbro_0989 | Hypothetical protein. | UDP-N-acetylglucosamine; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.419 |
Gbro_2440 | mshB | Gbro_2440 | Gbro_3329 | Hypothetical protein. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.699 |
Gbro_2440 | mshC | Gbro_2440 | Gbro_2442 | Hypothetical protein. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.854 |
Gbro_2440 | mshD | Gbro_2440 | Gbro_3934 | Hypothetical protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.483 |
Gbro_2441 | Gbro_2039 | Gbro_2441 | Gbro_2039 | Hypothetical protein. | PFAM: DSBA oxidoreductase. | 0.400 |
Gbro_2441 | Gbro_2440 | Gbro_2441 | Gbro_2440 | Hypothetical protein. | Hypothetical protein. | 0.959 |
Gbro_2441 | mshA | Gbro_2441 | Gbro_0989 | Hypothetical protein. | UDP-N-acetylglucosamine; Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2-acetamido-2- deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway. | 0.410 |
Gbro_2441 | mshB | Gbro_2441 | Gbro_3329 | Hypothetical protein. | 1D-myo-inosityl-2-acetamido-2-deoxy-alpha-D-gluc opyranosidedeacetylase; Catalyzes the deacetylation of 1D-myo-inositol 2-acetamido-2- deoxy-alpha-D-glucopyranoside (GlcNAc-Ins) in the mycothiol biosynthesis pathway. | 0.718 |
Gbro_2441 | mshC | Gbro_2441 | Gbro_2442 | Hypothetical protein. | cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily. | 0.892 |
Gbro_2441 | mshD | Gbro_2441 | Gbro_3934 | Hypothetical protein. | Mycothiol biosynthesis acetyltransferase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol. | 0.546 |
Gbro_3328 | Gbro_3330 | Gbro_3328 | Gbro_3330 | KEGG: slc2a12; solute carrier family 2 (facilitated glucose transporter), member 12; K08149 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12. | PFAM: extracellular solute-binding protein family 5; KEGG: mes:Meso_1835 extracellular solute-binding protein. | 0.829 |
Gbro_3328 | Gbro_3331 | Gbro_3328 | Gbro_3331 | KEGG: slc2a12; solute carrier family 2 (facilitated glucose transporter), member 12; K08149 MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 12. | TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: sfu:Sfum_2868 GTP-binding protein TypA. | 0.713 |
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