STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADH61987.1Periplasmic binding protein/LacI transcriptional regulator; COGs: COG1879 ABC-type sugar transport system periplasmic component; InterPro IPR001761; KEGG: str:Sterm_3044 periplasmic binding protein/LacI transcriptional regulator; PFAM: periplasmic binding protein/LacI transcriptional regulator; SPTR: C1XS39 Monosaccharide ABC transporter substrate-binding protein, CUT2 family; PFAM: family. (320 aa)    
Predicted Functional Partners:
ADH61986.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: ctc:CTC00906 ribose transport system permease protein RbsC; PFAM: inner-membrane translocator; SPTR: C1XS40 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.986
ADH61985.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: acr:Acry_1854 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1XS41 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter.
 
 0.961
ADH64695.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: rxy:Rxyl_1682 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C1XTQ1 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.938
ADH62129.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: lch:Lcho_2222 monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; SPTR: C1XRN5 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.923
ADH64694.1
Inner-membrane translocator; COGs: COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems permease components; InterPro IPR001851; KEGG: sus:Acid_7825 inner-membrane translocator; PFAM: inner-membrane translocator; SPTR: C1XTQ2 Monosaccharide ABC transporter membrane protein, CUT2 family; PFAM: Branched-chain amino acid transport system / permease component.
 
 0.922
rbsA
ABC transporter related protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.916
ADH62128.1
ABC transporter related protein; COGs: COG1129 ABC-type sugar transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dge:Dgeo_2855 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: C1XRN6 Monosaccharide ABC transporter ATP-binding protein, CUT2 family; PFAM: ABC transporter.
 
 0.897
ADH63724.1
CheA signal transduction histidine kinase; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR003594:IPR002545:IPR001789:IPR 005467:IPR004105:IPR004358:IPR011006:IPR009082; KEGG: dra:DR_A0355 CheA-related protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; Signal transducing histidine kinase homodimeric; CheW domain protein; SMART: response regulator receiver; ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein; SPTR: C1XT07 Chemotaxis protein histidine kinase-lik [...]
  
 
 0.825
ADH63719.1
COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR011006; KEGG: dra:DR_A0350 response regulator PilH, putative; PFAM: response regulator receiver; SMART: response regulator receiver; SPTR: C1XT12 Response regulator containing a CheY-like receiver domain and a GGDEF domain; PFAM: Response regulator receiver domain.
  
 
 0.733
ADH61988.1
Transcriptional regulator, LacI family; COGs: COG1609 Transcriptional regulators; InterPro IPR000843:IPR001761:IPR010982; KEGG: smd:Smed_4247 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; SPTR: C1XS38 Transcriptional regulator, LacI family; PFAM: Bacterial regulatory proteins, lacI family; family.
  
  
 0.602
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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