STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xylACOGs: COG2115 Xylose isomerase; InterPro IPR013022:IPR001998:IPR012307:IPR013453; KEGG: dge:Dgeo_2692 xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; PRIAM: Xylose isomerase; SPTR: C1XWA3 Xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: xylose isomerase, Arthrobacter type; Belongs to the xylose isomerase family. (387 aa)    
Predicted Functional Partners:
xylB
Xylulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018483:IPR006000:IPR018485:IPR018484; KEGG: dge:Dgeo_2691 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: C1XWA1 Xylulokinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase.
 
 
 0.967
xylB-3
Xylulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018483:IPR006000:IPR018485:IPR018484; KEGG: rxy:Rxyl_2898 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: C1XUV4 D-xylulose kinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase.
 
 
 0.949
xylB-2
Xylulokinase; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018483:IPR006000:IPR018485:IPR018484; KEGG: rxy:Rxyl_0402 xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; SPTR: C1XUW6 Xylulokinase; TIGRFAM: xylulokinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: D-xylulose kinase.
 
 
 0.948
ADH64887.1
Carbohydrate kinase, FGGY; COGs: COG1070 Sugar (pentulose and hexulose) kinase; InterPro IPR018483:IPR018485:IPR018484; KEGG: dge:Dgeo_2863 carbohydrate kinase, FGGY; PFAM: Carbohydrate kinase, FGGY-like; SPTR: C1XUW7 Pentulose/hexulose kinase; PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; Belongs to the FGGY kinase family.
 
 
 0.936
ADH62100.1
Alcohol dehydrogenase GroES domain protein; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterProIPR013149:IPR016040:IPR002328:IPR011032:IPR 013154; KEGG: ttr:Tter_2269 alcohol dehydrogenase GroES domain protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: C1XRR4 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
     
 0.906
ADH62814.1
Alcohol dehydrogenase zinc-binding domain protein; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013149:IPR016040:IPR011032:IPR013154; KEGG: tth:TTC0411 dehydrogenase family protein (alcohol); PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; SPTR: C1XSG0 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
     
 0.906
ADH63007.1
PfkB domain protein; COGs: COG0524 Sugar kinase ribokinase family; InterPro IPR011611:IPR002173; KEGG: dth:DICTH_0637 ribokinase:carbohydrate kinase, PfkB; PFAM: PfkB domain protein; SPTR: C1XXA7 Sugar kinase, ribokinase; PFAM: pfkB family carbohydrate kinase.
     
 0.906
ADH64890.1
Alcohol dehydrogenase GroES domain protein; COGs: COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenase; InterPro IPR013154:IPR013149:IPR011032:IPR016040; KEGG: scl:sce5374 hypothetical protein; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; SPTR: C1XUW4 Theronine dehydrogenase-like Zn-dependent dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase.
     
 0.906
ADH64812.1
ROK family protein; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: ttj:TTHA0299 glucokinase; PFAM: ROK family protein; SPTR: C1XV45 Glucokinase; PFAM: ROK family; TIGRFAM: ROK family protein (putative glucokinase).
    
 0.831
ADH62612.1
Aldose 1-epimerase; COGs: COG2017 Galactose mutarotase; InterPro IPR008183:IPR011013:IPR014718; KEGG: dge:Dgeo_2023 aldose 1-epimerase; PFAM: Aldose 1-epimerase; SPTR: C1XWA2 Galactose mutarotase-like enzyme; PFAM: Aldose 1-epimerase.
 
  
 0.764
Your Current Organism:
Meiothermus silvanus
NCBI taxonomy Id: 526227
Other names: M. silvanus DSM 9946, Meiothermus silvanus ATCC 700542, Meiothermus silvanus DSM 9946, Meiothermus silvanus VI-R2, Meiothermus silvanus str. DSM 9946, Meiothermus silvanus strain DSM 9946
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