STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
odhB_1Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex. (79 aa)    
Predicted Functional Partners:
lplJ_3
Lipoate-protein ligase LplJ.
  
 0.906
lipA
Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
 
  
 0.894
bfmBAB_1
2-oxoisovalerate dehydrogenase subunit beta.
  
 0.892
bfmBAB_2
2-oxoisovalerate dehydrogenase subunit beta.
  
 0.892
pdhB
Pyruvate dehydrogenase E1 component subunit beta.
  
 0.892
acoB
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta.
  
 0.892
bfmBAB_3
2-oxoisovalerate dehydrogenase subunit beta.
  
 0.892
acoA_5
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 
 0.882
lpd_4
Dihydrolipoyl dehydrogenase.
  
 0.882
acoA_2
Acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha.
 
 0.881
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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