STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_21190Hypothetical protein. (92 aa)    
Predicted Functional Partners:
ACWI_27550
Hypothetical protein.
    
 
 0.835
sufB
FeS cluster assembly protein SufB.
  
 
 0.820
sufC
Vegetative protein 296.
  
 
 0.774
prfA
Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.
     
 0.699
ACWI_02120
Hypothetical protein.
  
  
 0.649
iscU_1
Iron-sulfur cluster assembly scaffold protein IscU.
  
  
 0.649
iscU_2
Iron-sulfur cluster assembly scaffold protein IscU.
  
  
 0.649
ACWI_31780
Dinitrogenase iron-molybdenum cofactor.
  
  
 0.649
sfrB_1
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.644
sfrB_2
NADPH-Fe(3+) oxidoreductase subunit beta.
  
 
 0.644
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.