STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
porBPyruvate synthase subunit PorB. (303 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-flavodoxin oxidoreductase.
 
0.999
padG
NADH-dependent phenylglyoxylate dehydrogenase subunit alpha.
 0.999
korA
2-oxoglutarate oxidoreductase subunit KorA.
 
 0.998
porC
Pyruvate synthase subunit PorC.
 
 0.998
porD
Pyruvate synthase subunit PorD.
 
 0.997
ACWI_20690
Indolepyruvate oxidoreductase subunit beta.
  
 0.935
ybdL
Methionine aminotransferase.
 
 
 0.898
ACWI_02200
Flavodoxin.
  
 0.859
ACWI_28250
Ferredoxin.
  
 0.859
ACWI_27000
Phenylacetate-coenzyme A ligase.
 
     0.817
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.