STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACWI_30160HNH endonuclease. (117 aa)    
Predicted Functional Partners:
ACWI_33820
Phage terminase.
 
  
 0.874
ACWI_33870
Hypothetical protein.
 
    0.865
ACWI_03530
Phage terminase.
 
  
 0.855
ACWI_31330
Phage terminase.
 
  
 0.852
ACWI_33790
Phage portal protein.
 
  
 0.828
ACWI_33910
Hypothetical protein.
 
    0.798
traG
Conjugal transfer protein TraG.
   
 
 0.779
ACWI_33770
Phage capsid family protein.
 
   
 0.778
ACWI_27410
VRR-NUC domain protein.
 
     0.749
rapA
RNA polymerase-associated protein RapA.
 
   
 0.749
Your Current Organism:
Acetobacterium wieringae
NCBI taxonomy Id: 52694
Other names: A. wieringae, ATCC 43740, JCM 2380, LMG 7579, LMG:7579, strain C
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.