A0A4S8I2V5 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8I2V5

Uncharacterized protein. (81 aa)

Predicted Functional Partners:

A0A4S8IMN3

0.951

A0A4S8IMP5

0.951

A0A4S8IY70

0.951

A0A4S8J0L6

0.951

A0A4V4H4U1

0.951

A0A4S8I9J6

0.932

A0A4S8J8A9

0.910

A0A4S8K5P6

0.906

A0A4S8JNA9

0.895

A0A4S8IK75

0.890

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8I2V5	A0A4S8I9J6	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	0.932
A0A4S8I2V5	A0A4S8IK75	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit.	0.890
A0A4S8I2V5	A0A4S8IMN3	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A4S8I2V5	A0A4S8IMP5	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A4S8I2V5	A0A4S8IY70	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A4S8I2V5	A0A4S8J0L6	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A4S8I2V5	A0A4S8J8A9	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	0.910
A0A4S8I2V5	A0A4S8JNA9	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	0.895
A0A4S8I2V5	A0A4S8K5P6	Uncharacterized protein.	ATP-dependent Clp protease proteolytic subunit.	0.906
A0A4S8I2V5	A0A4V4H4U1	Uncharacterized protein.	Uncharacterized protein.	0.951
A0A4S8I9J6	A0A4S8I2V5	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	Uncharacterized protein.	0.932
A0A4S8I9J6	A0A4S8IK75	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	ATP-dependent Clp protease proteolytic subunit.	0.913
A0A4S8I9J6	A0A4S8IMN3	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	Uncharacterized protein.	0.949
A0A4S8I9J6	A0A4S8IMP5	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	Uncharacterized protein.	0.958
A0A4S8I9J6	A0A4S8IY70	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	Uncharacterized protein.	0.958
A0A4S8I9J6	A0A4S8J0L6	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	Uncharacterized protein.	0.958
A0A4S8I9J6	A0A4S8J8A9	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	0.960
A0A4S8I9J6	A0A4S8JNA9	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	0.940
A0A4S8I9J6	A0A4S8K5P6	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	ATP-dependent Clp protease proteolytic subunit.	0.913
A0A4S8I9J6	A0A4V4H4U1	ATP-dependent Clp protease proteolytic subunit; Belongs to the peptidase S14 family.	Uncharacterized protein.	0.958