STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8IWZ3GATA-type domain-containing protein. (320 aa)    
Predicted Functional Partners:
A0A4S8IEU9
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.572
A0A4S8K154
Uncharacterized protein.
    
  0.551
A0A4S8KG42
BTP domain-containing protein.
    
  0.551
A0A4S8IQK6
Uncharacterized protein.
    
  0.443
A0A4S8IRV5
Uncharacterized protein.
    
  0.443
A0A4S8J0Y7
Uncharacterized protein.
    
  0.443
A0A4S8JIB5
Uncharacterized protein.
    
  0.443
A0A4S8JRQ8
Uncharacterized protein.
    
  0.443
A0A4S8JUS4
Uncharacterized protein.
    
  0.443
A0A4S8J1T6
Uncharacterized protein.
    
 0.412
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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