A0A4S8J9N8 protein (Musa balbisiana) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A4S8J9N8

Uncharacterized protein; Belongs to the glycosyltransferase 1 family. (850 aa)

Predicted Functional Partners:

A0A4S8J3K4

0.941

A0A4S8JD26

0.941

A0A4S8INZ7

0.940

A0A4S8JME0

0.932

A0A4S8JL59

0.931

A0A4S8KCP3

0.925

A0A4S8JBT5

0.924

A0A4S8JEU8

0.924

A0A4S8KA01

0.923

A0A4S8IX55

0.922

Your Current Organism:

Musa balbisiana

NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A4S8INZ7	A0A4S8IX55	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	0.700
A0A4S8INZ7	A0A4S8J3K4	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A4S8INZ7	A0A4S8J9N8	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.940
A0A4S8INZ7	A0A4S8JBT5	Uncharacterized protein.	Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.	0.957
A0A4S8INZ7	A0A4S8JD26	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A4S8INZ7	A0A4S8JEU8	Uncharacterized protein.	Glucose-1-phosphate adenylyltransferase; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP-glucose from Glc-1-P and ATP.	0.957
A0A4S8INZ7	A0A4S8JL59	Uncharacterized protein.	NTP_transferase domain-containing protein.	0.947
A0A4S8INZ7	A0A4S8JME0	Uncharacterized protein.	NTP_transferase domain-containing protein.	0.954
A0A4S8INZ7	A0A4S8KA01	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.912
A0A4S8INZ7	A0A4S8KCP3	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.910
A0A4S8IX55	A0A4S8INZ7	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	Uncharacterized protein.	0.700
A0A4S8IX55	A0A4S8J3K4	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	Uncharacterized protein.	0.895
A0A4S8IX55	A0A4S8J9N8	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.922
A0A4S8IX55	A0A4S8JD26	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	Uncharacterized protein.	0.895
A0A4S8IX55	A0A4S8KA01	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.647
A0A4S8IX55	A0A4S8KCP3	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.700
A0A4S8J3K4	A0A4S8INZ7	Uncharacterized protein.	Uncharacterized protein.	0.966
A0A4S8J3K4	A0A4S8IX55	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyl hydrolase 32 family.	0.895
A0A4S8J3K4	A0A4S8J9N8	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.941
A0A4S8J3K4	A0A4S8KA01	Uncharacterized protein.	Uncharacterized protein; Belongs to the glycosyltransferase 1 family.	0.968