STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8K5I3NAC domain-containing protein. (278 aa)    
Predicted Functional Partners:
A0A4S8I9M4
RPA_C domain-containing protein.
    
 0.719
A0A4S8IYT1
OB domain-containing protein.
    
 0.719
A0A4S8ICG5
Uncharacterized protein.
    
 0.715
A0A4S8J889
Uncharacterized protein.
    
  0.616
A0A4S8IN98
Uncharacterized protein.
    
 0.612
A0A4V6T474
Uncharacterized protein.
    
 0.612
MED10
Mediator of RNA polymerase II transcription subunit 10; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
 0.597
A0A4S8IF11
dUTPase domain-containing protein.
    
  0.594
A0A4S8J5H7
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.594
A0A4S8K7H7
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
  0.594
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
Server load: low (28%) [HD]