STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A4S8K8U8TFIIB-type domain-containing protein. (513 aa)    
Predicted Functional Partners:
A0A4V4H4X3
Uncharacterized protein.
    
 0.981
A0A4V4H8J7
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.976
A0A4S8JHY4
RPOLD domain-containing protein.
    
 0.972
A0A4S8IR36
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.971
A0A4S8JEB9
SANT domain-containing protein.
    
 0.971
A0A4S8K060
Myb_DNA-bind_7 domain-containing protein.
    
 0.971
A0A4S8J9S5
Uncharacterized protein.
    
 0.965
A0A4S8K196
RPOL4c domain-containing protein.
    
 0.964
A0A4S8JMZ0
Uncharacterized protein.
    
 0.963
A0A4S8IKF8
Uncharacterized protein.
    
 0.960
Your Current Organism:
Musa balbisiana
NCBI taxonomy Id: 52838
Other names: Balbis banana, M. balbisiana, Musa BB Group, Musa balbisiana Colla, starchy banana
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